Migrate background task to new collective id

modules/common/src/main/scala/docspell/common/FileCopyTaskArgs.scala

@@ -14,7 +14,7 @@ import io.circe.generic.semiauto.{deriveDecoder, deriveEncoder}
 import io.circe.syntax._
 import io.circe.{Decoder, Encoder}
 
-/** This is the input to the `FileCopyTask`. The task copies all files from on
+/** This is the input to the `FileCopyTask`. The task copies all files from one
   * FileRepository to one ore more target repositories.
   *
   * If no `from` is given, the default file repository is used. For targets, a list of ids

modules/common/src/main/scala/docspell/common/FileKeyPart.scala

@@ -17,9 +17,10 @@ object FileKeyPart {
 
   case object Empty extends FileKeyPart
 
-  final case class Collective(collective: Ident) extends FileKeyPart
+  final case class Collective(collective: CollectiveId) extends FileKeyPart
 
-  final case class Category(collective: Ident, category: FileCategory) extends FileKeyPart
+  final case class Category(collective: CollectiveId, category: FileCategory)
+      extends FileKeyPart
 
   final case class Key(key: FileKey) extends FileKeyPart
 
@@ -37,7 +38,7 @@ object FileKeyPart {
   implicit val jsonDecoder: Decoder[FileKeyPart] =
     Decoder.instance { cursor =>
       for {
-        cid <- cursor.getOrElse[Option[Ident]]("collective")(None)
+        cid <- cursor.getOrElse[Option[CollectiveId]]("collective")(None)
         cat <- cursor.getOrElse[Option[FileCategory]]("category")(None)
         emptyObj = cursor.keys.exists(_.isEmpty)
 

modules/common/src/main/scala/docspell/common/syntax/StringSyntax.scala

@@ -15,9 +15,7 @@ trait StringSyntax {
       Option(s).filter(_.trim.nonEmpty)
 
     def parseJsonAs[A](implicit d: Decoder[A]): Either[Throwable, A] =
-      for {
-        json <- parser.decode[A](s)
-      } yield json
+      parser.decode[A](s)
   }
 }
 

modules/store/src/main/scala/db/migration/common/MigrateCollectiveIdTaskArgs.scala

@@ -0,0 +1,457 @@
+package db.migration.common
+
+import cats.syntax.all._
+import cats.effect._
+import docspell.common._
+import docspell.store.records.{RCollective, RJob, RPeriodicTask, RUser}
+import doobie._
+import doobie.implicits._
+import db.migration.data.{
+  AllPreviewsArgs => AllPreviewArgsLegacy,
+  ConvertAllPdfArgs => ConvertAllPdfArgsLegacy,
+  DownloadZipArgs => DownloadZipArgsLegacy,
+  EmptyTrashArgs => EmptyTrashArgsLegacy,
+  FileIntegrityCheckArgs => FileIntegrityCheckArgsLegacy,
+  ItemAddonTaskArgs => ItemAddonTaskArgsLegacy,
+  LearnClassifierArgs => LearnClassifierArgsLegacy,
+  PeriodicDueItemsArgs => PeriodicDueItemsArgsLegacy,
+  PeriodicQueryArgs => PeriodicQueryArgsLegacy,
+  ProcessItemArgs => ProcessItemArgsLegacy,
+  ReIndexTaskArgs => ReIndexTaskArgsLegacy,
+  ScanMailboxArgs => ScanMailboxArgsLegacy,
+  ScheduledAddonTaskArgs => ScheduledAddonTaskArgsLegacy
+}
+import docspell.notification.api.{PeriodicDueItemsArgs, PeriodicQueryArgs}
+import docspell.store.qb._
+import docspell.store.qb.DSL._
+import io.circe.{Decoder, Encoder, parser}
+import org.flywaydb.core.api.migration.Context
+
+object MigrateCollectiveIdTaskArgs extends TransactorSupport {
+
+  val logger = docspell.logging.getLogger[IO]
+  val loggerCIO = docspell.logging.getLogger[ConnectionIO]
+
+  def run(ctx: Context): IO[Unit] = {
+    val tx = mkTransactor(ctx)
+    migrateAllPreviewsArgs(tx)
+  }
+
+  def migrateAllPreviewsArgs(xa: Transactor[IO]) =
+    for {
+      _ <- logger.info(s"Loading account info mappings")
+      idMap <- collectiveIdMapping.transact(xa)
+      accMap <- accountInfoMapping.transact(xa)
+
+      _ <- logger.info("Converting job and periodic task arguments")
+      _ <- convertJob[ScheduledAddonTaskArgsLegacy, ScheduledAddonTaskArgs](
+        ScheduledAddonTaskArgsLegacy.taskName,
+        convertScheduledAddonTaskArgs(idMap)
+      ).transact(xa)
+      _ <- convertPeriodicJob[ScheduledAddonTaskArgsLegacy, ScheduledAddonTaskArgs](
+        ScheduledAddonTaskArgsLegacy.taskName,
+        convertScheduledAddonTaskArgs(idMap)
+      ).transact(xa)
+
+      _ <- convertJob[ReIndexTaskArgsLegacy, ReIndexTaskArgs](
+        ReIndexTaskArgsLegacy.taskName,
+        convertReIndexTaskArgs(idMap)
+      ).transact(xa)
+
+      _ <- convertJob[ProcessItemArgsLegacy, ProcessItemArgs](
+        ProcessItemArgsLegacy.taskName,
+        convertProcessItemArgs(idMap)
+      ).transact(xa)
+      _ <- convertJob[ProcessItemArgsLegacy, ProcessItemArgs](
+        ProcessItemArgsLegacy.multiUploadTaskName,
+        convertProcessItemArgs(idMap)
+      ).transact(xa)
+
+      _ <- convertJob[LearnClassifierArgsLegacy, LearnClassifierArgs](
+        LearnClassifierArgsLegacy.taskName,
+        convertLearnClassifierArgs(idMap)
+      ).transact(xa)
+      _ <- convertPeriodicJob[LearnClassifierArgsLegacy, LearnClassifierArgs](
+        LearnClassifierArgsLegacy.taskName,
+        convertLearnClassifierArgs(idMap)
+      ).transact(xa)
+
+      _ <- convertJob[ItemAddonTaskArgsLegacy, ItemAddonTaskArgs](
+        ItemAddonTaskArgsLegacy.taskName,
+        convertItemAddonTaskArgs(idMap)
+      ).transact(xa)
+
+      _ <- convertJob[FileIntegrityCheckArgsLegacy, FileIntegrityCheckArgs](
+        FileIntegrityCheckArgsLegacy.taskName,
+        convertFileIntegrityCheckArgs(idMap)
+      ).transact(xa)
+
+      _ <- convertJob[EmptyTrashArgsLegacy, EmptyTrashArgs](
+        EmptyTrashArgsLegacy.taskName,
+        convertEmptyTrashArgs(idMap)
+      ).transact(xa)
+      _ <- convertPeriodicJob[EmptyTrashArgsLegacy, EmptyTrashArgs](
+        EmptyTrashArgsLegacy.taskName,
+        convertEmptyTrashArgs(idMap)
+      ).transact(xa)
+
+      _ <- convertJob[AllPreviewArgsLegacy, AllPreviewsArgs](
+        AllPreviewArgsLegacy.taskName,
+        convertAllPreviewsArgs(idMap)
+      ).transact(xa)
+
+      _ <- convertJob[ConvertAllPdfArgsLegacy, ConvertAllPdfArgs](
+        ConvertAllPdfArgsLegacy.taskName,
+        convertAllPdfArgs(idMap)
+      ).transact(xa)
+
+      _ <- convertJob[ScanMailboxArgsLegacy, ScanMailboxArgs](
+        ScanMailboxArgsLegacy.taskName,
+        convertScanMailboxArgs(accMap)
+      ).transact(xa)
+      _ <- convertPeriodicJob[ScanMailboxArgsLegacy, ScanMailboxArgs](
+        ScanMailboxArgsLegacy.taskName,
+        convertScanMailboxArgs(accMap)
+      ).transact(xa)
+
+      _ <- convertJob[PeriodicDueItemsArgsLegacy, PeriodicDueItemsArgs](
+        PeriodicDueItemsArgsLegacy.taskName,
+        convertPeriodicDueItemsArgs(accMap)
+      ).transact(xa)
+      _ <- convertPeriodicJob[PeriodicDueItemsArgsLegacy, PeriodicDueItemsArgs](
+        PeriodicDueItemsArgsLegacy.taskName,
+        convertPeriodicDueItemsArgs(accMap)
+      ).transact(xa)
+
+      _ <- convertJob[PeriodicQueryArgsLegacy, PeriodicQueryArgs](
+        PeriodicQueryArgs.taskName,
+        convertPeriodicQueryArgs(accMap)
+      ).transact(xa)
+      _ <- convertPeriodicJob[PeriodicQueryArgsLegacy, PeriodicQueryArgs](
+        PeriodicQueryArgs.taskName,
+        convertPeriodicQueryArgs(accMap)
+      ).transact(xa)
+
+      // The new DownloadZipArgs are not in scope here. These jobs are deleted, as they are
+      // done in 99% probably. If not a user will just click again on the "download all"
+      // button
+      _ <- RJob.deleteByTask(DownloadZipArgsLegacy.taskName).transact(xa)
+      _ <- logger.info("Done converting task arguments.")
+
+      _ <- logger.info("Updating job submitter info")
+      _ <- updateJobSubmitter(idMap, accMap).transact(xa)
+    } yield ()
+
+  def updateJobSubmitter(
+      idMap: Map[Ident, CollectiveId],
+      accMap: Map[AccountId, AccountInfo]
+  ) = {
+    val job = RJob.as("j")
+    val pt = RPeriodicTask.as("pt")
+
+    val updateUser =
+      accMap.toList.traverse_ { case (accId, accInfo) =>
+        val up1 =
+          DML.update(
+            job,
+            job.group === accId.collective && job.submitter === accId.user,
+            DML.set(
+              job.group.setTo(accInfo.collectiveId.valueAsIdent),
+              job.submitter.setTo(accInfo.userId)
+            )
+          )
+
+        val up2 =
+          DML.update(
+            pt,
+            pt.group === accId.collective && pt.submitter === accId.user,
+            DML.set(
+              pt.group.setTo(accInfo.collectiveId.valueAsIdent),
+              pt.submitter.setTo(accInfo.userId)
+            )
+          )
+
+        val up3 =
+          DML.update(
+            job,
+            job.group === accId.collective && job.submitter === accId.collective,
+            DML.set(
+              job.group.setTo(accInfo.collectiveId.valueAsIdent),
+              job.submitter.setTo(accInfo.collectiveId.valueAsIdent)
+            )
+          )
+
+        val up4 =
+          DML.update(
+            pt,
+            pt.group === accId.collective && pt.submitter === accId.collective,
+            DML.set(
+              pt.group.setTo(accInfo.collectiveId.valueAsIdent),
+              pt.submitter.setTo(accInfo.collectiveId.valueAsIdent)
+            )
+          )
+
+        up1 *> up2 *> up3 *> up4
+      }
+
+    val updateJobGroup =
+      idMap.toList.traverse_ { case (cname, cid) =>
+        val up1 =
+          DML.update(job, job.group === cname, DML.set(job.group.setTo(cid.valueAsIdent)))
+        val up2 =
+          DML.update(pt, pt.group === cname, DML.set(pt.group.setTo(cid.valueAsIdent)))
+        up1 *> up2
+      }
+
+    updateUser *> updateJobGroup
+  }
+
+  def convertJob[S: Decoder, T: Encoder](
+      task: Ident,
+      conv: S => Option[T]
+  ): ConnectionIO[Int] =
+    for {
+      jobs <- RJob.findByTaskName(task)
+      converted =
+        jobs.traverse(j =>
+          convertJobArgs(j)(conv)
+            .map(_.pure[ConnectionIO])
+            .recoverWith {
+              case ex if JobState.isDone(j.state) =>
+                val cause = Option(ex.getCause).getOrElse(ex)
+                Either.right(
+                  loggerCIO.warn(
+                    s"Removing old job '${j.id.id}', because argument parsing failed: ${cause.getMessage}"
+                  ) *> RJob.delete(j.id).as(Option.empty[RJob])
+                )
+            }
+        )
+      conv <- Sync[ConnectionIO]
+        .pure(converted)
+        .rethrow
+        .flatMap(_.sequence)
+        .map(_.flatten)
+      _ <- conv.traverse_(j => RJob.setArgs(j.id, j.args))
+    } yield conv.size
+
+  def convertPeriodicJob[S: Decoder, T: Encoder](
+      task: Ident,
+      conv: S => Option[T]
+  ): ConnectionIO[Int] =
+    for {
+      jobs <- RPeriodicTask.findByTask(task)
+      converted <- Sync[ConnectionIO]
+        .pure(jobs.traverse(j => convertPeriodicJobArgs(j)(conv)))
+        .rethrow
+        .map(_.flatten)
+      _ <- converted.traverse_(j => RPeriodicTask.setArgs(j.id, j.args))
+    } yield converted.size
+
+  private def convertPeriodicDueItemsArgs(accMap: Map[AccountId, AccountInfo])(
+      oldArgs: PeriodicDueItemsArgsLegacy
+  ) =
+    accMap
+      .get(oldArgs.account)
+      .map(acc =>
+        PeriodicDueItemsArgs(
+          account = acc,
+          channels = oldArgs.channels,
+          remindDays = oldArgs.remindDays,
+          daysBack = oldArgs.daysBack,
+          tagsInclude = oldArgs.tagsInclude,
+          tagsExclude = oldArgs.tagsExclude,
+          baseUrl = oldArgs.baseUrl
+        )
+      )
+
+  private def convertPeriodicQueryArgs(
+      accMap: Map[AccountId, AccountInfo]
+  )(oldArgs: PeriodicQueryArgsLegacy) =
+    accMap
+      .get(oldArgs.account)
+      .map(acc =>
+        PeriodicQueryArgs(
+          account = acc,
+          channels = oldArgs.channels,
+          query = oldArgs.query,
+          bookmark = oldArgs.bookmark,
+          baseUrl = oldArgs.baseUrl,
+          contentStart = oldArgs.contentStart
+        )
+      )
+
+  private def convertScanMailboxArgs(
+      accMap: Map[AccountId, AccountInfo]
+  )(oldArgs: ScanMailboxArgsLegacy) =
+    accMap
+      .get(oldArgs.account)
+      .map(acc =>
+        ScanMailboxArgs(
+          account = acc,
+          imapConnection = oldArgs.imapConnection,
+          scanRecursively = oldArgs.scanRecursively,
+          folders = oldArgs.folders,
+          receivedSince = oldArgs.receivedSince,
+          targetFolder = oldArgs.targetFolder,
+          deleteMail = oldArgs.deleteMail,
+          direction = oldArgs.direction,
+          itemFolder = oldArgs.itemFolder,
+          fileFilter = oldArgs.fileFilter,
+          tags = oldArgs.tags,
+          subjectFilter = oldArgs.subjectFilter,
+          language = oldArgs.language,
+          postHandleAll = oldArgs.postHandleAll,
+          attachmentsOnly = oldArgs.attachmentsOnly
+        )
+      )
+
+  private def convertScheduledAddonTaskArgs(idMap: Map[Ident, CollectiveId])(
+      oldArgs: ScheduledAddonTaskArgsLegacy
+  ) =
+    idMap
+      .get(oldArgs.collective)
+      .map(cid => ScheduledAddonTaskArgs(cid, oldArgs.addonTaskId))
+
+  private def convertReIndexTaskArgs(
+      idMap: Map[Ident, CollectiveId]
+  )(oldArgs: ReIndexTaskArgsLegacy) =
+    oldArgs.collective.flatMap { cname =>
+      idMap
+        .get(cname)
+        .map(cid => ReIndexTaskArgs(cid.some))
+    }
+
+  private def convertProcessItemArgs(idMap: Map[Ident, CollectiveId])(
+      oldArgs: ProcessItemArgsLegacy
+  ) =
+    idMap
+      .get(oldArgs.meta.collective)
+      .map(cid =>
+        ProcessItemArgs(
+          ProcessItemArgs.ProcessMeta(
+            collective = cid,
+            itemId = oldArgs.meta.itemId,
+            language = oldArgs.meta.language,
+            direction = oldArgs.meta.direction,
+            sourceAbbrev = oldArgs.meta.sourceAbbrev,
+            folderId = oldArgs.meta.folderId,
+            validFileTypes = oldArgs.meta.validFileTypes,
+            skipDuplicate = oldArgs.meta.skipDuplicate,
+            fileFilter = oldArgs.meta.fileFilter,
+            tags = oldArgs.meta.tags,
+            reprocess = oldArgs.meta.reprocess,
+            attachmentsOnly = oldArgs.meta.attachmentsOnly
+          ),
+          oldArgs.files.map(f =>
+            ProcessItemArgs
+              .File(f.name, FileKey(cid, f.fileMetaId.category, f.fileMetaId.id))
+          )
+        )
+      )
+
+  private def convertLearnClassifierArgs(idMap: Map[Ident, CollectiveId])(
+      oldArgs: LearnClassifierArgsLegacy
+  ) =
+    idMap
+      .get(oldArgs.collective)
+      .map(cid => LearnClassifierArgs(cid))
+
+  private def convertItemAddonTaskArgs(idMap: Map[Ident, CollectiveId])(
+      oldArgs: ItemAddonTaskArgsLegacy
+  ) =
+    idMap
+      .get(oldArgs.collective)
+      .map(cid => ItemAddonTaskArgs(cid, oldArgs.itemId, oldArgs.addonRunConfigs))
+
+  private def convertFileIntegrityCheckArgs(idMap: Map[Ident, CollectiveId])(
+      oldArgs: FileIntegrityCheckArgsLegacy
+  ) =
+    oldArgs.pattern match {
+      case FileIntegrityCheckArgsLegacy.FileKeyPart.Key(key) =>
+        idMap
+          .get(key.collective)
+          .map(cid =>
+            FileIntegrityCheckArgs(FileKeyPart.Key(FileKey(cid, key.category, key.id)))
+          )
+
+      case FileIntegrityCheckArgsLegacy.FileKeyPart.Collective(cname) =>
+        idMap
+          .get(cname)
+          .map(cid => FileIntegrityCheckArgs(FileKeyPart.Collective(cid)))
+
+      case FileIntegrityCheckArgsLegacy.FileKeyPart.Category(cname, category) =>
+        idMap
+          .get(cname)
+          .map(cid => FileIntegrityCheckArgs(FileKeyPart.Category(cid, category)))
+
+      case FileIntegrityCheckArgsLegacy.FileKeyPart.Empty =>
+        None
+    }
+
+  private def convertEmptyTrashArgs(idMap: Map[Ident, CollectiveId])(
+      oldArgs: EmptyTrashArgsLegacy
+  ) =
+    idMap.get(oldArgs.collective).map(cid => EmptyTrashArgs(cid, oldArgs.minAge))
+
+  private def convertAllPreviewsArgs(idMap: Map[Ident, CollectiveId])(
+      oldArgs: AllPreviewArgsLegacy
+  ) =
+    oldArgs.collective.flatMap { cname =>
+      idMap
+        .get(cname)
+        .map(cid => AllPreviewsArgs(cid.some, oldArgs.storeMode))
+    }
+
+  private def convertAllPdfArgs(idMap: Map[Ident, CollectiveId])(
+      oldArgs: ConvertAllPdfArgsLegacy
+  ) =
+    oldArgs.collective.flatMap(cname =>
+      idMap.get(cname).map(cid => ConvertAllPdfArgs(cid.some))
+    )
+
+  def convertJobArgs[S: Decoder, T: Encoder](
+      job: RJob
+  )(update: S => Option[T]): Either[Throwable, Option[RJob]] =
+    for {
+      oldArgs <- parser
+        .decode[S](job.args)
+        .leftMap(err =>
+          new IllegalStateException(
+            s"Error parsing arguments of job: ${job.id.id}",
+            err
+          )
+        )
+      upJob = update(oldArgs).map(j => job.withArgs(j))
+    } yield upJob
+
+  def convertPeriodicJobArgs[S: Decoder, T: Encoder](
+      job: RPeriodicTask
+  )(update: S => Option[T]): Either[Throwable, Option[RPeriodicTask]] =
+    for {
+      oldArgs <- parser
+        .decode[S](job.args)
+        .leftMap(err =>
+          new IllegalStateException(
+            s"Error parsing arguments of periodic task: ${job.id.id}",
+            err
+          )
+        )
+      upJob = update(oldArgs).map(j => job.withArgs(j))
+    } yield upJob
+
+  private def collectiveIdMapping: ConnectionIO[Map[Ident, CollectiveId]] =
+    RCollective.findAll(_.id).map(_.map(coll => coll.name -> coll.id).toMap)
+
+  private def accountInfoMapping: ConnectionIO[Map[AccountId, AccountInfo]] = {
+    val u = RUser.as("u")
+    val c = RCollective.as("c")
+
+    Select(
+      select(c.id, c.name, u.uid, u.login),
+      from(u).innerJoin(c, c.id === u.cid)
+    ).build
+      .query[AccountInfo]
+      .to[List]
+      .map(_.map(a => a.asAccountId -> a).toMap)
+  }
+}

modules/store/src/main/scala/db/migration/common/MigrateDueItemTasks.scala

@@ -6,8 +6,8 @@ import cats.implicits._
 import docspell.common._
 import docspell.common.syntax.StringSyntax._
 import docspell.notification.api._
-import docspell.store.queries.QLogin
 import docspell.store.records._
+import docspell.store.qb.DSL._
 import db.migration.data.{
   PeriodicDueItemsArgs => PeriodicDueItemsArgsLegacy,
   PeriodicQueryArgs => PeriodicQueryArgsLegacy,
@@ -103,8 +103,7 @@ object MigrateDueItemTasks extends TransactorSupport with JsonCodecs {
   private def saveChannel(ch: Channel, account: AccountId): ConnectionIO[ChannelRef] =
     (for {
       newId <- OptionT.liftF(Ident.randomId[ConnectionIO])
-      userData <- OptionT(QLogin.findAccount(account))
-      userId = userData.userId
+      userId <- OptionT(findIdByAccountId(account))
       r <- RNotificationChannel.fromChannel(ch, newId, userId)
       _ <- OptionT.liftF(RNotificationChannel.insert(r))
       _ <- OptionT.liftF(
@@ -113,4 +112,9 @@ object MigrateDueItemTasks extends TransactorSupport with JsonCodecs {
       ref = r.asRef
     } yield ref)
       .getOrElseF(Sync[ConnectionIO].raiseError(new Exception("User not found!")))
+
+  def findIdByAccountId(accountId: AccountId): ConnectionIO[Option[Ident]] =
+    sql"select u.uid from user_ u where u.cid = ${accountId.collective} and u.login = ${accountId.user}"
+      .query[Ident]
+      .option
 }

modules/store/src/main/scala/db/migration/common/MigrateNotifyTasks.scala

@@ -3,14 +3,13 @@ package db.migration.common
 import cats.data.{NonEmptyList, OptionT}
 import cats.effect.{IO, Sync}
 import cats.implicits._
-
 import docspell.common._
 import docspell.common.syntax.StringSyntax._
 import docspell.notification.api._
-import docspell.store.queries.QLogin
-import docspell.store.records._
-
+import docspell.store.records.{RNotificationChannelMail, RPeriodicTask}
+import docspell.store.qb.DSL._
 import db.migration.data.{PeriodicDueItemsArgs => PeriodicDueItemsArgsLegacy, _}
+import docspell.store.qb.DML
 import doobie._
 import doobie.implicits._
 import emil.MailAddress
@@ -74,20 +73,20 @@ object MigrateNotifyTasks extends TransactorSupport {
       }
 
     for {
-      userData <- OptionT(QLogin.findAccount(old.account))
-      userId = userData.userId
+      userId <- OptionT(findIdByAccountId(old.account))
       id <- OptionT.liftF(Ident.randomId[ConnectionIO])
       now <- OptionT.liftF(Timestamp.current[ConnectionIO])
+      connId <- OptionT(findSmtpConnectionId(old.smtpConnection, userId))
       chName = Some("migrate notify items")
       ch = RNotificationChannelMail(
         id,
         userId,
         chName,
-        old.smtpConnection,
+        connId,
         recs,
         now
       )
-      _ <- OptionT.liftF(RNotificationChannelMail.insert(ch))
+      _ <- OptionT.liftF(insert(ch))
       args = PeriodicDueItemsArgsLegacy(
         old.account,
         NonEmptyList.of(ChannelRef(ch.id, ChannelType.Mail, chName)),
@@ -99,4 +98,24 @@ object MigrateNotifyTasks extends TransactorSupport {
       )
     } yield args
   }
+
+  def findIdByAccountId(accountId: AccountId): ConnectionIO[Option[Ident]] =
+    sql"select u.uid from user_ u where u.cid = ${accountId.collective} and u.login = ${accountId.user}"
+      .query[Ident]
+      .option
+
+  def findSmtpConnectionId(name: Ident, userId: Ident): ConnectionIO[Option[Ident]] =
+    sql"select id from useremail where uid = $userId and (name = $name or id = $name)"
+      .query[Ident]
+      .option
+
+  // insert without 'name' column, it was added afterwards
+  def insert(r: RNotificationChannelMail): ConnectionIO[Int] = {
+    val t = RNotificationChannelMail.T
+    DML.insert(
+      t,
+      NonEmptyList.of(t.id, t.uid, t.connection, t.recipients, t.created),
+      sql"${r.id},${r.uid},${r.connection},${r.recipients},${r.created}"
+    )
+  }
 }

modules/store/src/main/scala/db/migration/data/FileIntegrityCheckArgs.scala

@@ -0,0 +1,84 @@
+/*
+ * Copyright 2020 Eike K. & Contributors
+ *
+ * SPDX-License-Identifier: AGPL-3.0-or-later
+ */
+
+package db.migration.data
+
+import cats.implicits._
+import db.migration.data.FileIntegrityCheckArgs.FileKeyPart
+import docspell.common.{FileCategory, Ident}
+import io.circe.generic.semiauto.{deriveDecoder, deriveEncoder}
+import io.circe.{Decoder, Encoder}
+import io.circe.syntax._
+import io.circe.DecodingFailure
+
+/** @deprecated `FileKey` and `FileKeyPart` was replaced to use a `CollectiveId` */
+final case class FileIntegrityCheckArgs(pattern: FileKeyPart)
+
+object FileIntegrityCheckArgs {
+  val taskName: Ident = Ident.unsafe("all-file-integrity-check")
+
+  final case class FileKey(collective: Ident, category: FileCategory, id: Ident) {
+    override def toString =
+      s"${collective.id}/${category.id.id}/${id.id}"
+  }
+
+  object FileKey {
+
+    implicit val jsonDecoder: Decoder[FileKey] =
+      deriveDecoder[FileKey]
+
+    implicit val jsonEncoder: Encoder[FileKey] =
+      deriveEncoder[FileKey]
+  }
+
+  sealed trait FileKeyPart {}
+
+  object FileKeyPart {
+
+    case object Empty extends FileKeyPart
+
+    final case class Collective(collective: Ident) extends FileKeyPart
+
+    final case class Category(collective: Ident, category: FileCategory)
+        extends FileKeyPart
+
+    final case class Key(key: FileKey) extends FileKeyPart
+
+    implicit val jsonEncoder: Encoder[FileKeyPart] =
+      Encoder.instance {
+        case Empty => ().asJson
+        case Collective(cid) =>
+          Map("collective" -> cid.asJson).asJson
+        case Category(cid, cat) =>
+          Map("collective" -> cid.asJson, "category" -> cat.asJson).asJson
+        case Key(key) =>
+          key.asJson
+      }
+
+    implicit val jsonDecoder: Decoder[FileKeyPart] =
+      Decoder.instance { cursor =>
+        for {
+          cid <- cursor.getOrElse[Option[Ident]]("collective")(None)
+          cat <- cursor.getOrElse[Option[FileCategory]]("category")(None)
+          emptyObj = cursor.keys.exists(_.isEmpty)
+
+          c3 = cursor.as[FileKey].map(Key).toOption
+          c2 = (cid, cat).mapN(Category)
+          c1 = cid.map(Collective)
+          c0 = Option.when(emptyObj)(Empty)
+
+          c = c3.orElse(c2).orElse(c1).orElse(c0)
+          res <- c.toRight(DecodingFailure("", cursor.history))
+        } yield res
+      }
+  }
+
+  implicit val jsonDecoder: Decoder[FileIntegrityCheckArgs] =
+    deriveDecoder
+
+  implicit val jsonEncoder: Encoder[FileIntegrityCheckArgs] =
+    deriveEncoder
+}

modules/store/src/main/scala/db/migration/data/ProcessItemArgs.scala

@@ -7,7 +7,7 @@
 package db.migration.data
 
 import ProcessItemArgs._
-import docspell.common._
+import docspell.common.{FileIntegrityCheckArgs => _, _}
 import docspell.common.syntax.all._
 
 import io.circe._
@@ -68,7 +68,7 @@ object ProcessItemArgs {
     implicit val jsonDecoder: Decoder[ProcessMeta] = deriveDecoder[ProcessMeta]
   }
 
-  case class File(name: Option[String], fileMetaId: FileKey)
+  case class File(name: Option[String], fileMetaId: FileIntegrityCheckArgs.FileKey)
   object File {
     implicit val jsonEncoder: Encoder[File] = deriveEncoder[File]
     implicit val jsonDecoder: Decoder[File] = deriveDecoder[File]

modules/store/src/main/scala/db/migration/data/ScheduledAddonTaskArgs.scala

@@ -12,9 +12,6 @@ import io.circe.{Decoder, Encoder}
 
 /** @deprecated
   *   This has been replaced with a version using a `CollectiveId`
-  *
-  * @param collective
-  * @param addonTaskId
   */
 final case class ScheduledAddonTaskArgs(collective: Ident, addonTaskId: Ident)
 

modules/store/src/main/scala/db/migration/h2/V1_39_2__MigrateTasks.scala

@@ -0,0 +1,18 @@
+/*
+ * Copyright 2020 Eike K. & Contributors
+ *
+ * SPDX-License-Identifier: AGPL-3.0-or-later
+ */
+
+package db.migration.h2
+
+import cats.effect.unsafe.implicits._
+import db.migration.common.MigrateCollectiveIdTaskArgs
+import org.flywaydb.core.api.migration.{BaseJavaMigration, Context}
+
+class V1_39_2__MigrateTasks extends BaseJavaMigration {
+  val logger = org.log4s.getLogger
+
+  override def migrate(ctx: Context): Unit =
+    MigrateCollectiveIdTaskArgs.run(ctx).unsafeRunSync()
+}

modules/store/src/main/scala/db/migration/mariadb/V1_39_2__MigrateTasks.scala

@@ -0,0 +1,18 @@
+/*
+ * Copyright 2020 Eike K. & Contributors
+ *
+ * SPDX-License-Identifier: AGPL-3.0-or-later
+ */
+
+package db.migration.mariadb
+
+import cats.effect.unsafe.implicits._
+import db.migration.common.MigrateCollectiveIdTaskArgs
+import org.flywaydb.core.api.migration.{BaseJavaMigration, Context}
+
+class V1_39_2__MigrateTasks extends BaseJavaMigration {
+  val logger = org.log4s.getLogger
+
+  override def migrate(ctx: Context): Unit =
+    MigrateCollectiveIdTaskArgs.run(ctx).unsafeRunSync()
+}

modules/store/src/main/scala/db/migration/postgresql/V1_39_2__MigrateTasks.scala

@@ -0,0 +1,18 @@
+/*
+ * Copyright 2020 Eike K. & Contributors
+ *
+ * SPDX-License-Identifier: AGPL-3.0-or-later
+ */
+
+package db.migration.postgresql
+
+import cats.effect.unsafe.implicits._
+import db.migration.common.MigrateCollectiveIdTaskArgs
+import org.flywaydb.core.api.migration.{BaseJavaMigration, Context}
+
+class V1_39_2__MigrateTasks extends BaseJavaMigration {
+  val logger = org.log4s.getLogger
+
+  override def migrate(ctx: Context): Unit =
+    MigrateCollectiveIdTaskArgs.run(ctx).unsafeRunSync()
+}

modules/store/src/main/scala/docspell/store/file/BinnyUtils.scala

@@ -29,8 +29,8 @@ object BinnyUtils {
   def fileKeyPartToPrefix(fkp: FileKeyPart): Option[String] =
     fkp match {
       case FileKeyPart.Empty              => None
-      case FileKeyPart.Collective(cid)    => Some(s"${cid.id}/%")
-      case FileKeyPart.Category(cid, cat) => Some(s"${cid.id}/${cat.id.id}/%")
+      case FileKeyPart.Collective(cid)    => Some(s"${cid.value}/%")
+      case FileKeyPart.Category(cid, cat) => Some(s"${cid.value}/${cat.id.id}/%")
       case FileKeyPart.Key(key)           => Some(fileKeyToBinaryId(key).id)
     }
 

modules/store/src/main/scala/docspell/store/qb/DML.scala

@@ -76,7 +76,7 @@ object DML extends DoobieMeta {
       setter: Nel[Setter[_]]
   ): Fragment = {
     val condFrag = cond.map(SelectBuilder.cond).getOrElse(Fragment.empty)
-    fr"UPDATE" ++ FromExprBuilder.buildTable(table) ++ fr"SET" ++
+    fr"UPDATE" ++ FromExprBuilder.buildTable(table) ++ fr" SET" ++
       setter
         .map(s => buildSetter(s))
         .reduceLeft(_ ++ comma ++ _) ++

modules/store/src/main/scala/docspell/store/records/RJob.scala

@@ -44,6 +44,9 @@ case class RJob(
 
   def isInProgress: Boolean =
     JobState.inProgress.contains(state)
+
+  def withArgs[A: Encoder](args: A): RJob =
+    copy(args = Encoder[A].apply(args).noSpaces)
 }
 
 object RJob {
@@ -151,6 +154,13 @@ object RJob {
     )
   }
 
+  def findByTaskName(task: Ident): ConnectionIO[Vector[RJob]] =
+    Select(
+      select(T.all),
+      from(T),
+      T.task === task
+    ).build.query[RJob].to[Vector]
+
   def findFromIds(ids: Seq[Ident]): ConnectionIO[Vector[RJob]] =
     NonEmptyList.fromList(ids.toList) match {
       case None =>
@@ -180,6 +190,12 @@ object RJob {
     )
   }
 
+  def setJsonArgs[A: Encoder](jobId: Ident, args: A): ConnectionIO[Int] =
+    DML.update(T, T.id === jobId, DML.set(T.args.setTo(Encoder[A].apply(args).noSpaces)))
+
+  def setArgs(jobId: Ident, args: String): ConnectionIO[Int] =
+    DML.update(T, T.id === jobId, DML.set(T.args.setTo(args)))
+
   def incrementRetries(jobid: Ident): ConnectionIO[Int] =
     DML
       .update(
@@ -301,6 +317,14 @@ object RJob {
       n1 <- DML.delete(T, T.id === jobId)
     } yield n0 + n1
 
+  def deleteByTask(task: Ident): ConnectionIO[Int] = {
+    val query = Select(select(T.id), from(T), T.task === task)
+    for {
+      n1 <- DML.delete(RJobLog.T, RJobLog.T.jobId.in(query))
+      n2 <- DML.delete(T, T.task === task)
+    } yield n1 + n2
+  }
+
   def findIdsDoneAndOlderThan(ts: Timestamp): Stream[ConnectionIO, Ident] =
     run(
       select(T.id),

modules/store/src/main/scala/docspell/store/records/RPeriodicTask.scala

@@ -9,14 +9,13 @@ package docspell.store.records
 import cats.data.NonEmptyList
 import cats.effect._
 import cats.implicits._
-
 import docspell.common._
 import docspell.store.qb.DSL._
 import docspell.store.qb._
-
 import com.github.eikek.calev.CalEvent
 import doobie._
 import doobie.implicits._
+import io.circe.Encoder
 
 /** A periodic task is a special job description, that shares a few properties of a
   * `RJob`. It must provide all information to create a `RJob` value eventually.
@@ -38,6 +37,9 @@ case class RPeriodicTask(
     summary: Option[String]
 ) {
 
+  def withArgs[A: Encoder](args: A): RPeriodicTask =
+    copy(args = Encoder[A].apply(args).noSpaces)
+
   def toJob[F[_]: Sync]: F[RJob] =
     for {
       now <- Timestamp.current[F]
@@ -112,6 +114,9 @@ object RPeriodicTask {
   def updateTask(id: Ident, taskName: Ident, args: String): ConnectionIO[Int] =
     DML.update(T, T.id === id, DML.set(T.task.setTo(taskName), T.args.setTo(args)))
 
+  def setArgs(taskId: Ident, args: String): ConnectionIO[Int] =
+    DML.update(T, T.id === taskId, DML.set(T.args.setTo(args)))
+
   def setEnabledByTask(taskName: Ident, enabled: Boolean): ConnectionIO[Int] =
     DML.update(T, T.task === taskName, DML.set(T.enabled.setTo(enabled)))